rs234368 chr19:39970735 T>G
- Sequence
cacgcccgcgcggcgcacaatctt[T/G]ggatcagcgccacgtggagacctt
- ASB in cell types
- K562 (myelogenous leukemia) GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- NFIC_HUMAN CDN1B_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NFIC_HUMAN | 1.63 | n/a | 2.00 | -1.18 | Weak Concordant | |||
| CDN1B_HUMAN | 0.21 | 1.51 | 2.00 | n/a | n/a |
Items per page:
1 – 2 of 2
Motif analysis
