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rs234369 chr19:39970830 G>A

Sequence
cctccagcccagacactagaaagc[G/A]aagagcagttggccgccagactgt
ASB in cell types
primary B-CLL cells monocytes from periferal blood
ASB for transcription factors
BRD4_HUMAN SRBP2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
BRD4_HUMAN 1.90 -0.06 3.6·10-31.00 2.50 n/a n/a
SRBP2_HUMAN 2.86 -0.05 5.6·10-31.00 3.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP aortic valve calcium obesity with early age of onset (age >2) triglycerides
GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Artery_Aorta Artery_Tibial Breast_Mammary_Tissue Colon_Sigmoid Colon_Transverse Esophagus_Mucosa Esophagus_Muscularis Heart_Left_Ventricle Lung Muscle_Skeletal Nerve_Tibial Pancreas Prostate Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Small_Intestine_Terminal_Ileum Spleen Stomach Testis Thyroid

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