rs2344500 chr12:26723687 G>A

Sequence
gttctggcattttgccattggcca[G/A]taacaaaatatcagggatattatt
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
FOXK2_HUMAN ZN687_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXK2_HUMAN 2.17 n/a 0.031.00 1.00 n/a n/a
ZN687_HUMAN -2.45 2.39 1.000.03 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP birth weight ldl cholesterol prop taste detection threshold total cholesterol triglycerides
GTEx eQTL Brain_Cerebellum Esophagus_Mucosa

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