rs2346911 chr3:16512376 G>A

Sequence
tacaagggttccagcacatgagtt[G/A]ctggaaactggggtgaccactgac
ASB in cell types
GM01310 ( Transformed lymphovlasoid cell line ) GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
TFE2_HUMAN AHR_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TFE2_HUMAN 2.56 n/a 0.011.00 1.00 n/a No Hit
AHR_HUMAN 1.78 -0.54 0.021.00 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Esophagus_Gastroesophageal_Junction Esophagus_Muscularis

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