ADASTRA v5.1.3
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rs235284
chr21:44865750
C
>
A
Sequence
cacagaaggctgtgtttcagatct[C/A]tctgtgagaggaagtgtgccctgt
ASB in cell types
macrophages form periferal blood
monocyte-derived macrophages from peripheral blood
MM1.S (plasma cell myeloma)
MDM(monocyte derived macrophages)
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(+4 others)
ASB for transcription factors
SPI1_HUMAN
IKZF1_HUMAN
CDK9_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SPI1_HUMAN
2.02
0.45
6.9·10
-19
1.00
1.31
n/a
No Hit
IKZF1_HUMAN
2.60
0.61
5.8·10
-5
1.00
1.33
n/a
No Hit
CDK9_HUMAN
1.54
0.16
0.02
1.00
1.60
n/a
n/a
Items per page:
5
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GRASP
asthma
,
bipolar disorder
,
hdl cholesterol
GTEx eQTL
Adipose_Subcutaneous
,
Adrenal_Gland
,
Artery_Aorta
,
Artery_Tibial
,
Cells_Cultured_fibroblasts
,
Colon_Sigmoid
,
Esophagus_Muscularis
,
Liver
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Stomach
,
Testis
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)