ADASTRA v5.1.3
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rs236448
chr6:36735318
A
>
C
Sequence
acccatagacttaactctgaagtt[A/C]tgcaactgcttacaggaagatgcg
ASB in cell types
tibial nerve
CD14+ monocytes
upper lobe of left lung
gastroesophageal sphincter
Show more
(+2 others)
ASB for transcription factors
EP300_HUMAN
CTCF_HUMAN
STAT1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
EP300_HUMAN
2.24
-0.39
3.2·10
-11
1.00
1.31
n/a
n/a
CTCF_HUMAN
1.35
-0.21
4.5·10
-5
1.00
1.03
n/a
No Hit
STAT1_HUMAN
2.51
n/a
5.5·10
-3
1.00
3.00
n/a
No Hit
Items per page:
5
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GRASP
bipolar disorder
,
comorbid depressive syndrome and alcohol dependence
,
diastolic blood pressure (dbp)
,
height
,
sporadic creutzfeldt-jakob disease
,
systolic blood pressure (sbp)
,
total cholesterol
GTEx eQTL
Esophagus_Mucosa
,
Heart_Atrial_Appendage
,
Skin_Not_Sun_Exposed_Suprapubic
,
Whole_Blood
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)