ADASTRA v5.1.3
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rs236449
chr6:36735066
G
>
A
Sequence
tctaagagaagagggcttttggga[G/A]ctgagggtgagcaggggcagaatg
ASB in cell types
GM02610 (Lymphoblastoid Cell Lines)
GM12890 (Lymphoblastoid Cell Lines)
ASB for transcription factors
STAG1_HUMAN
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View in UCSC Genome Browser
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0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAG1_HUMAN
0.09
1.42
1.00
0.05
1.00
n/a
n/a
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
bipolar disorder
,
body mass index (bmi)
,
comorbid depressive syndrome and alcohol dependence
,
diastolic blood pressure (dbp)
,
sporadic creutzfeldt-jakob disease
,
systolic blood pressure (sbp)
GTEx eQTL
Skin_Not_Sun_Exposed_Suprapubic
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)