rs236675 chr4:87089449 T>C

Sequence
tcctctccttcaaaaaagttctta[T/C]ttgctaatagtgtgtatcagggaa
ASB in cell types
HepG2 (hepatoblastoma)
ASB for transcription factors
TBX3_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TBX3_HUMAN 3.19 -2.88 3.5·10-41.00 1.00 n/a No Hit
Items per page:
1 – 1 of 1

Motif analysis

No data available

Genetic associations

GRASP common carotid artery thickness (average of near and far wall measures),  internal carotid artery thickness (average of near and far walls)
GTEx eQTL Artery_Tibial,  Brain_Cerebellum,  Cells_Cultured_fibroblasts

Download