ADASTRA v5.1.3
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rs236675
chr4:87089449
T
>
C
Sequence
tcctctccttcaaaaaagttctta[T/C]ttgctaatagtgtgtatcagggaa
ASB in cell types
HepG2 (hepatoblastoma)
ASB for transcription factors
TBX3_HUMAN
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0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TBX3_HUMAN
3.19
-2.88
3.5·10
-4
1.00
1.00
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
common carotid artery thickness (average of near and far wall measures)
,
internal carotid artery thickness (average of near and far walls)
GTEx eQTL
Artery_Tibial
,
Brain_Cerebellum
,
Cells_Cultured_fibroblasts
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)