rs2370038 chr12:77848097 A>T
- Sequence
aacacctataaaaccacaacaaga[A/T]tagtcagaatataaaagatggcct
- ASB in cell types
- TTC-1240 (Rhabdoid tumor of the kidney) PANC1 (pancreatic ductal adenocarcinoma) HT29 (colon adenocarcinoma)
- ASB for transcription factors
- SMRC1_HUMAN SSXT_HUMAN FOXA2_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMRC1_HUMAN | 0.25 | 2.08 | 1.00 | n/a | n/a | |||
| SSXT_HUMAN | 0.39 | 1.72 | 1.00 | n/a | n/a | |||
| FOXA2_HUMAN | 0.12 | 2.87 | 1.50 | n/a | No Hit |
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