ADASTRA v5.1.3
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Bill Cipher
. You can switch to the latest ADASTRA version:
adastra.autosome.org
rs237603
chr10:27319758
G
>
C
Sequence
agacagtagtggcgcttcggccgc[G/C]cccagggccgcggttcgctcttcc
ASB in cell types
SMMC-7721 (hepatocellular carcinoma)
ASB for transcription factors
CATA_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CATA_HUMAN
-1.66
2.71
1.00
0.03
2.00
n/a
n/a
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GTEx eQTL
Adipose_Subcutaneous
,
Adipose_Visceral_Omentum
,
Artery_Aorta
,
Brain_Caudate_basal_ganglia
,
Brain_Nucleus_accumbens_basal_ganglia
,
Brain_Putamen_basal_ganglia
,
Cells_Cultured_fibroblasts
,
Esophagus_Gastroesophageal_Junction
,
Esophagus_Mucosa
,
Esophagus_Muscularis
,
Lung
,
Nerve_Tibial
,
Pituitary
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Spleen
,
Testis
,
Thyroid
,
Uterus
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)