ADASTRA v5.1.3
Search
Browse
Annotate
Help
Downloads
About
rs2386660
chr10:5630096
C
>
T
Sequence
ccctgtatctctggcttcatcctg[C/T]agccaattaattcaaccagtatat
ASB in cell types
GM02255 (Lymphoblastoid Cell Lines)
FT282 (normal human fallopian tube tissue)
GM19238 (female B-cells lymphoblastoid cell lines)
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
GM02255 (Lymphoblastoid Cell Lines)
-0.47
0.74
1.00
6.5·10
-3
1.00
FT282 (normal human fallopian tube tissue)
-0.52
2.07
1.00
0.01
1.00
GM19238 (female B-cells lymphoblastoid cell lines)
-0.39
0.60
1.00
0.04
1.17
Items per page:
5
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GRASP
age at death with kuru exposure
,
asthma
,
fasting insulin
,
hdl cholesterol
,
homa-b
,
homa-ir
,
ldl cholesterol
,
tetrology of fallot
,
total cholesterol
GTEx eQTL
Adipose_Subcutaneous
,
Artery_Aorta
,
Esophagus_Mucosa
,
Lung
,
Nerve_Tibial
,
Skin_Not_Sun_Exposed_Suprapubic
,
Thyroid
,
Whole_Blood
Download
Download page in JSON
Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale