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rs239261 chr11:65225886 A>G

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
K562 (myelogenous leukemia) 0.79 0.12 9.0·10-51.00 2.04
LNCaP (prostate carcinoma) -2.00 2.19 1.007.2·10-4 1.00
LNCaP C4-2B (prostate carcinoma) 0.47 3.20 1.009.4·10-4 1.00
GM18505 (female B-cells Lymphoblastoid Cell Lines) 1.52 -1.06 2.9·10-31.00 1.00
gastrocnemius medialis 2.51 -2.35 0.011.00 1.00
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol height infant head circumference
GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Artery_Aorta Artery_Tibial Brain_Anterior_cingulate_cortex_BA24 Brain_Cerebellar_Hemisphere Brain_Cortex Breast_Mammary_Tissue Cells_Cultured_fibroblasts Colon_Sigmoid Colon_Transverse Esophagus_Mucosa Esophagus_Muscularis Heart_Atrial_Appendage Lung Muscle_Skeletal Nerve_Tibial Pancreas Pituitary Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Testis Thyroid Whole_Blood

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