rs2394838 chr10:71713111 C>G
- Sequence
acccagaagggcctttcagagtag[C/G]ggggagaaagagacgtcacaattt
- ASB in cell types
- K562 (myelogenous leukemia) MOLT-4 (Adult T acute lymphoblastic leukemia) BEAS-2B (bronchial epithelium) SEM (childhood B acute lymphoblastic leukemia)
- ASB for transcription factors
- MGAP_HUMAN ARI1B_HUMAN SPT5H_HUMAN GCR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MGAP_HUMAN | 2.79 | -2.52 | 1.00 | n/a | n/a | |||
| ARI1B_HUMAN | 2.83 | -2.82 | 1.00 | n/a | n/a | |||
| SPT5H_HUMAN | 1.83 | -0.99 | 1.00 | n/a | n/a | |||
| GCR_HUMAN | -0.41 | 2.00 | 1.00 | n/a | No Hit | |||
| RING2_HUMAN | 2.89 | -2.78 | 1.00 | n/a | n/a |
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