ADASTRA v5.1.3
Search
Browse
Annotate
Help
Downloads
About
rs2395655
chr6:36677919
A
>
G
Sequence
aacaaagctgctgcaaccacaggg[A/G]tttcttctgttcaggtgagtgtag
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
IKZF2_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF2_HUMAN
n/a
4.36
1.00
2.3·10
-9
1.00
n/a
n/a
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
EMBL-EBI
height
,
triglycerides
GRASP
2 hour glucose
,
birth weight
,
comorbid depressive syndrome and alcohol dependence
,
coronary artery disease (cad)
,
response to lithium treatment for bipolar disorder
,
time-to-recurrence during lithium treatment for bipolar disorder
,
triglycerides
Download
Download page in JSON
Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale
log2(Alt/Ref motif p-value)