rs239933 chr6:166999742 A>G
- Sequence
ccgcggactgggggtgcctggccc[A/G]tcccctgcctcattccgtgggggc
- ASB in cell types
- HepG2 (hepatoblastoma) K562 (myelogenous leukemia) adult erythroblasts
- ASB for transcription factors
- TYY1_HUMAN ILF3_HUMAN RBBP5_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TYY1_HUMAN | 1.90 | -0.48 | 2.50 | n/a | No Hit | |||
| ILF3_HUMAN | -0.89 | 1.79 | 1.00 | n/a | n/a | |||
| RBBP5_HUMAN | 2.10 | -1.05 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Nerve_Tibial, Pancreas, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid, Vagina, Whole_Blood