rs240308 chr6:79949332 T>C
- Sequence
cttaagtccctattcactaggggg[T/C]gccagtcacgtataagaaaatcat
- ASB in cell types
- GM17942 (lymphoblastoid cell) PANC1 (pancreatic ductal adenocarcinoma) Peyer's patch pancreas
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -0.21 | 2.54 | 1.59 | 3.70 | Concordant |
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Motif analysis
