rs240375 chr6:75284856 G>A
- Sequence
aaagtcggctggagacgccagagg[G/A]agggagagagggaggagggagaag
- ASB in cell types
- MDA-MB-231p27CK-DD (breast cancer cells, phosphimimetic p27 cell line) macrophages form periferal blood pancreas primary B-CLL cells
- ASB for transcription factors
- CTCF_HUMAN CDN1B_HUMAN JUN_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.46 | 1.05 | 1.10 | -2.68 | Concordant | |||
| CDN1B_HUMAN | -0.51 | 1.88 | 1.62 | n/a | n/a | |||
| JUN_HUMAN | 0.24 | 1.41 | 1.25 | n/a | No Hit |
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Motif analysis
