rs241588 chr6:157489700 C>T
- Sequence
atgtctgagataagaaccgcaatg[C/T]gtggcctcttacagcagtggggag
- ASB in cell types
- CTV-1 (Adult T acute lymphoblastic leukemia) K562 (myelogenous leukemia) Th1-cells MOLT-4 (Adult T acute lymphoblastic leukemia)
- ASB for transcription factors
- MTG16_HUMAN SMCA4_HUMAN TBX21_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MTG16_HUMAN | -2.13 | 2.53 | 1.00 | n/a | n/a | |||
| SMCA4_HUMAN | 0.95 | 2.78 | 2.20 | n/a | n/a | |||
| TBX21_HUMAN | -1.33 | 1.67 | 1.00 | n/a | No Hit |
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