rs2423038 chr20:4814481 G>A
- Sequence
gctgagactctgagctctgtgtgc[G/A]gagatcttgaggtttcctctactc
- ASB in cell types
- MDM(monocyte derived macrophages) CD14+ monocytes GM10847 (female B-cells Lymphoblastoid Cell Lines) germinal center CD77+ B cells
- ASB for transcription factors
- SPI1_HUMAN FOXP1_HUMAN CTCF_HUMAN STAT1_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 1.49 | 0.25 | 1.69 | n/a | No Hit | |||
| FOXP1_HUMAN | 1.74 | -1.38 | 1.83 | n/a | No Hit | |||
| CTCF_HUMAN | 0.60 | 1.05 | 1.00 | n/a | No Hit | |||
| STAT1_HUMAN | 1.52 | 0.04 | 2.33 | n/a | No Hit |
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