rs2425236 chr20:36384156 G>C
- Sequence
cctttgagctgtgctgtttggggt[G/C]cggggcactcgtttgcctctgtcc
- ASB in cell types
- HCT-116 (colon carcinoma) Ishikawa (endometrial adenocarcinoma)
- ASB for transcription factors
- COT1_HUMAN NFKB2_HUMAN NR2C1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| COT1_HUMAN | 2.65 | -2.44 | 1.00 | n/a | No Hit | |||
| NFKB2_HUMAN | -4.37 | 2.57 | 1.50 | n/a | No Hit | |||
| NR2C1_HUMAN | 2.16 | -1.83 | 1.00 | n/a | No Hit |
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