rs2426863 chr20:59992681 A>G
- Sequence
tgattatttttggtaataattctt[A/G]aaatggtaaacaagggaccaatac
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) MCF7 WS8 cells MS-1 (Small cell lung carcinoma) MCF7L-P(immortalized breast epithelial cell line)
- ASB for transcription factors
- FOXA1_HUMAN RAD21_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 0.35 | 2.03 | 3.17 | n/a | No Hit | |||
| RAD21_HUMAN | 0.44 | 2.63 | 2.25 | n/a | n/a | |||
| CTCF_HUMAN | 0.93 | 2.00 | 2.14 | n/a | No Hit |
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