rs242798 chr20:60060729 C>T

Sequence
ggcctggctgcacagccagcctgc[C/T]tgggtccagatcccagactcacca
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
BRD4_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
BRD4_HUMAN 2.38 0.10 9.0·10-30.96 1.40 n/a n/a
Items per page:
1 – 1 of 1

Motif analysis

No data available

Genetic associations

GRASP total cholesterol change with statins,  triglycerides change with statins
GTEx eQTL Adipose_Visceral_Omentum,  Esophagus_Mucosa,  Muscle_Skeletal,  Nerve_Tibial,  Prostate,  Spleen,  Thyroid,  Whole_Blood

Download