rs2427992 chr9:133703719 T>C
- Sequence
acggcacagctgtgaatgcaggtg[T/C]gggcaattcttaacctcccagggc
- ASB in cell types
- ICN12 (primary pre-B acute lymphomablastic leukemia) RPMI8226 (Plasma cell myeloma)
- ASB for transcription factors
- TFE2_HUMAN IKZF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TFE2_HUMAN | -4.76 | 2.87 | 1.50 | -2.17 | Discordant | |||
| IKZF1_HUMAN | -3.91 | 2.19 | 1.50 | n/a | No Hit |
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Motif analysis
