rs242800 chr20:60060831 G>A
- Sequence
tcaacactaagaagactcagttga[G/A]tcatgttcatgatggagtgcttgc
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma)
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| MCF7 (Invasive ductal breast carcinoma) | 1.34 | 0.19 | 3.52 |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Visceral_Omentum, Esophagus_Mucosa, Muscle_Skeletal, Nerve_Tibial, Prostate, Spleen, Whole_Blood