ADASTRA v5.1.3
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Bill Cipher
. You can switch to the latest ADASTRA version:
adastra.autosome.org
rs242803
chr20:60062644
C
>
G
Sequence
cagtgccgaagtgctgcctggcct[C/G]tcaggaaccagctgcagctgggat
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
BRD4_HUMAN
CLOCK_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
BRD4_HUMAN
2.09
-0.08
6.2·10
-5
0.93
2.33
n/a
n/a
CLOCK_HUMAN
2.83
-0.05
0.02
0.90
3.00
n/a
No Hit
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
major depressive disorder
,
total cholesterol change with statins
,
triglycerides change with statins
GTEx eQTL
Adipose_Visceral_Omentum
,
Brain_Cerebellar_Hemisphere
,
Brain_Hypothalamus
,
Heart_Atrial_Appendage
,
Lung
,
Muscle_Skeletal
,
Nerve_Tibial
,
Spleen
,
Whole_Blood
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)