ADASTRA v5.1.3
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rs2436082
chr17:3712799
T
>
C
Sequence
tctactaaaagtgcaaaaattagc[T/C]gggcatggtggtgggtccctgtag
ASB in cell types
Th1-cells
J-Lat A72
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View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Th1-cells
1.56
-0.90
0.04
1.00
1.00
J-Lat A72
1.16
-0.21
0.04
0.96
1.00
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GTEx eQTL
Brain_Caudate_basal_ganglia
,
Brain_Cerebellar_Hemisphere
,
Brain_Cerebellum
,
Cells_Cultured_fibroblasts
,
Cells_EBV-transformed_lymphocytes
,
Heart_Atrial_Appendage
,
Muscle_Skeletal
,
Skin_Sun_Exposed_Lower_leg
,
Testis
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale