rs2436082 chr17:3712799 T>C

Sequence
tctactaaaagtgcaaaaattagc[T/C]gggcatggtggtgggtccctgtag
ASB in cell types
Th1-cells J-Lat A72

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Th1-cells 1.56 -0.90 0.041.00 1.00
J-Lat A72 1.16 -0.21 0.040.96 1.00
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Motif analysis

No data available

Genetic associations

GTEx eQTL Brain_Caudate_basal_ganglia Brain_Cerebellar_Hemisphere Brain_Cerebellum Cells_Cultured_fibroblasts Cells_EBV-transformed_lymphocytes Heart_Atrial_Appendage Muscle_Skeletal Skin_Sun_Exposed_Lower_leg Testis

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