rs2439593 chr5:112737192 C>T

Sequence
tgtcagggactgctctaaatactt[C/T]atatatattaactcctctattctg
ASB in cell types
MDM(monocyte derived macrophages)
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
MDM(monocyte derived macrophages) 2.33 0.14 0.031.00 2.83
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Motif analysis

No data available

Genetic associations

GRASP fasting blood glucose,  homa-b,  obesity with early age of onset (age >2)
GTEx eQTL Adrenal_Gland,  Esophagus_Muscularis,  Heart_Atrial_Appendage,  Muscle_Skeletal,  Skin_Not_Sun_Exposed_Suprapubic

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