rs245058 chr5:149956943 T>C
- Sequence
aaaaactatcaatgtctgagtcaa[T/C]accaataaaagtatatctggtagt
- ASB in cell types
- VCaP (prostate carcinoma) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN FOXA1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | n/a | 3.11 | 2.00 | n/a | No Hit | |||
| FOXA1_HUMAN | -0.01 | 2.67 | 2.00 | 1.29 | Weak Concordant |
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Motif analysis
