ADASTRA v5.1.3
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rs2460
chr15:52780887
G
>
A
Sequence
gaaaccgtcgattctgaatatccc[G/A]tggcggcatatgcaaaggaagatg
ASB in cell types
CD14+ monocytes
H929 (plasma cell myeloma)
ASB for transcription factors
STAT1_HUMAN
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View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAT1_HUMAN
2.50
n/a
0.02
1.00
3.00
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
aortic valve calcium
,
ldl cholesterol
,
lung function, predicted ratio of forced expiratory volume in 1 second (fev1) to forced vital capacity (fvc) (fev1/fvc)
,
obesity with early age of onset (age >2)
,
total cholesterol
,
triglycerides
GTEx eQTL
Brain_Cerebellum
,
Liver
,
Testis
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)