rs246184 chr16:14301220 G>C
- Sequence
ttaggaaggggatgagctgctggg[G/C]gggggcatctcccttactgcggga
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) GM19238 (female B-cells lymphoblastoid cell lines) MS-1 (Small cell lung carcinoma) GM18526 (B – cells Lymphoblastoid Cell Lines)
- ASB for transcription factors
- STAG1_HUMAN CTCF_HUMAN RAD21_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | -0.55 | 0.85 | 1.24 | n/a | n/a | |||
| CTCF_HUMAN | 0.12 | 0.93 | 1.30 | n/a | No Hit | |||
| RAD21_HUMAN | -1.05 | 1.79 | 1.00 | n/a | n/a |
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