rs246213 chr16:16022165 G>C

Sequence
ggctggggtcaggtcaggcagggc[G/C]tgggtgggagctggcagggctggc
ASB in cell types
breast tumor CD14+ monocytes HEK293 (embryonic kidney) 22RV1 (prostate carcinoma)
ASB for transcription factors
INT11_HUMAN ESR1_HUMAN STAT1_HUMAN
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Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
INT11_HUMAN 2.39 0.24 6.0·10-30.70 2.00 n/a n/a
ESR1_HUMAN 1.39 1.79 8.3·10-31.00 1.46 n/a No Hit
STAT1_HUMAN n/a 2.88 1.008.3·10-3 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Muscle_Skeletal

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