ADASTRA v5.1.3
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Bill Cipher
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rs246570
chr5:72510972
C
>
A
Sequence
ggttaggagccactgttctcactt[C/A]ctgcagcaacctggagatgctagt
ASB in cell types
EOL-1 (Acute myeloid leukemia)
CD14+ monocytes
ASB for transcription factors
STAT1_HUMAN
SMRC1_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAT1_HUMAN
2.11
n/a
0.04
1.00
2.00
n/a
No Hit
SMRC1_HUMAN
1.94
-1.62
0.04
1.00
1.00
n/a
n/a
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
height
,
infant head circumference
,
ldl cholesterol
,
obesity with early age of onset (age >2)
,
refractive error
,
rheumatoid arthritis
,
total cholesterol
,
triglycerides
GTEx eQTL
Adipose_Subcutaneous
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)