rs246773 chr1:43834577 A>G

Sequence
ccttcctaagacacttcgttgacc[A/G]cagcctcacactctcctgctcttt
ASB in cell types
K562 (myelogenous leukemia) LNCaP C4-2B (prostate carcinoma)
ASB for transcription factors
ENL_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ENL_HUMAN 0.07 2.10 1.000.03 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Artery_Aorta Artery_Tibial Brain_Caudate_basal_ganglia Brain_Cerebellar_Hemisphere Brain_Cerebellum Breast_Mammary_Tissue Cells_Cultured_fibroblasts Colon_Sigmoid Esophagus_Gastroesophageal_Junction Esophagus_Muscularis Heart_Left_Ventricle Lung Muscle_Skeletal Skin_Sun_Exposed_Lower_leg Spleen Whole_Blood

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