ADASTRA v5.1.3
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rs247241
chr5:62431897
T
>
C
Sequence
agaagttgcagtgagctgagattg[T/C]atcactgcactccagcctgggtga
ASB for transcription factors
ATF3_HUMAN
CEBPB_HUMAN
CEBPG_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ATF3_HUMAN
n/a
3.15
1.00
2.4·10
-6
2.00
4.11
Concordant
CEBPB_HUMAN
-4.75
2.34
1.00
0.02
2.00
5.82
Concordant
CEBPG_HUMAN
n/a
2.69
1.00
0.04
2.00
5.60
Concordant
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1 – 3 of 3
Motif analysis
ATF3_HUMAN
Concordant
Show reverse complement
Show rev. comp.
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CEBPG_HUMAN
Concordant
CEBPB_HUMAN
Concordant
Genetic associations
GTEx eQTL
Adipose_Subcutaneous
,
Adrenal_Gland
,
Artery_Aorta
,
Artery_Tibial
,
Cells_Cultured_fibroblasts
,
Esophagus_Mucosa
,
Esophagus_Muscularis
,
Heart_Atrial_Appendage
,
Nerve_Tibial
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Testis
,
Thyroid
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)
Go to motif analysis