ADASTRA v5.1.3
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rs2479409
chr1:55038977
G
>
A
Sequence
gaattctgaatgtacctatatgac[G/A]tctttgcaaacttaaaacctgaat
ASB in cell types
GM23248
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
GM23248
2.32
-0.33
0.03
1.00
1.00
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
EMBL-EBI
cholesterol, total
,
ldl cholesterol
,
ldl cholesterol levels
,
low density lipoprotein cholesterol levels
,
plasma proprotein convertase subtilisin/kexin type 9 levels in stable coronary artery disease
,
total cholesterol levels
GRASP
circulating pcsk9 levels
,
coronary artery disease (cad)
,
ldl cholesterol
,
lp-pla2 mass
,
rheumatoid arthritis
,
total cholesterol
,
triglycerides
GTEx eQTL
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Spleen
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale