rs249123 chr5:16921385 C>A

Sequence
ggtgaggggtctgagaacggggac[C/A]aatgaaagccttagcgcagtggtt
ASB in cell types
TTC-1240 (Rhabdoid tumor of the kidney)
ASB for transcription factors
SMCA4_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SMCA4_HUMAN -1.12 2.10 1.008.3·10-4 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration advanced age-related macular degeneration (geographic atrophy) comorbid depressive syndrome and alcohol dependence salmonella-induced pyroptosis transmission distortion
GTEx eQTL Whole_Blood

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