rs249493 chr5:14144290 C>G

Sequence
gaggctcttaccccggaggccgag[C/G]ggactgagccggggccggtccggg
ASB in cell types
K562 (myelogenous leukemia) GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
EGR1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
EGR1_HUMAN 2.04 0.94 7.1·10-41.00 1.06 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Colon_Transverse Skin_Not_Sun_Exposed_Suprapubic Thyroid

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