rs2497761 chr10:17998863 C>T

Sequence
ggcaaaccacattataatgcaatc[C/T]cccttgtagtcttaggccatgtaa
ASB in cell types
iPSC (induced pluripotent stem cells)
ASB for transcription factors
DUX4_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
DUX4_HUMAN n/a 2.30 1.000.04 1.00 1.41 Weak Concordant
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Motif analysis

DUX4_HUMAN Weak Concordant
DUX4_HUMAN pic

Genetic associations

GRASP 2 hour glucose,  college completion,  comorbid depressive syndrome and alcohol dependence,  ldl cholesterol change with statins,  total cholesterol change with statins,  years of education
GTEx eQTL Brain_Caudate_basal_ganglia

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