ADASTRA v5.1.3
Search
Browse
Annotate
Help
Downloads
About
rs249852
chr12:98471139
G
>
C
Sequence
taatacacaccccaaaatattgta[G/C]tttctgtgtgagcaggaacaacgt
ASB in cell types
VCaP (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN
0.00
0.95
1.00
0.03
1.71
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
refractive error
GTEx eQTL
Brain_Nucleus_accumbens_basal_ganglia
,
Heart_Atrial_Appendage
,
Heart_Left_Ventricle
,
Nerve_Tibial
,
Ovary
,
Pancreas
,
Pituitary
,
Testis
,
Thyroid
Download
Download page in JSON
Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale
log2(Alt/Ref motif p-value)