rs250508 chr19:8269396 C>T
- Sequence
taagtgaaagtattaagccgttga[C/T]ctctccaagaaataatgacataag
- ASB in cell types
- K562 (myelogenous leukemia) GM12878 (female B-cells lymphoblastoid cell line) LNCaP (prostate carcinoma)
- ASB for transcription factors
- FOXK2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | 2.46 | 0.93 | 1.75 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP hdl cholesterol, maternal transmission distortion, pulmonary arterial hypertension (pah), triglycerides