rs2505639 chr10:35185493 A>G

Sequence
tctgtgacatcaaactaattatca[A/G]ctgaaaaatacacattcaaatata
ASB for transcription factors
STAG1_HUMAN
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View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAG1_HUMAN 1.30 -0.47 0.021.00 1.20 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP crohns disease,  maternal transmission distortion,  transmission distortion,  triglycerides
GTEx eQTL Artery_Tibial,  Brain_Caudate_basal_ganglia,  Cells_Cultured_fibroblasts,  Cells_EBV-transformed_lymphocytes,  Lung,  Muscle_Skeletal,  Pituitary,  Skin_Sun_Exposed_Lower_leg,  Stomach,  Thyroid,  Whole_Blood

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