rs2516712 chr6:30259563 C>A

Sequence
agcttcgccgcgatcccggcacta[C/A]gatcccggcactacagtcccggcg
ASB for transcription factors
RBM25_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RBM25_HUMAN 1.78 0.82 7.0·10-30.58 4.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP cystatin c in serum,  rheumatoid arthritis,  systolic blood pressure (sbp)
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Artery_Tibial,  Brain_Caudate_basal_ganglia,  Brain_Cerebellar_Hemisphere,  Brain_Cerebellum,  Brain_Nucleus_accumbens_basal_ganglia,  Breast_Mammary_Tissue,  Cells_Cultured_fibroblasts,  Colon_Transverse,  Esophagus_Mucosa,  Heart_Atrial_Appendage,  Liver,  Lung,  Muscle_Skeletal,  Nerve_Tibial,  Prostate,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Stomach,  Testis,  Thyroid,  Whole_Blood

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