rs2518384 chr11:112270971 A>G
- Sequence
cttatctcagtctgcagagcagaa[A/G]cagggtgagggccatggatctgaa
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- ZN316_HUMAN MTG16_HUMAN NFIC_HUMAN REQU_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN316_HUMAN | n/a | 2.60 | 2.00 | n/a | n/a | |||
| MTG16_HUMAN | n/a | 2.48 | 2.00 | n/a | n/a | |||
| NFIC_HUMAN | n/a | 3.38 | 2.00 | 0.80 | Weak Concordant | |||
| REQU_HUMAN | -1.17 | 2.79 | 2.00 | n/a | n/a | |||
| MGAP_HUMAN | -5.17 | 2.99 | 2.00 | n/a | n/a |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Aorta, Artery_Tibial, Brain_Frontal_Cortex_BA9, Brain_Nucleus_accumbens_basal_ganglia, Colon_Sigmoid, Colon_Transverse, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Liver, Muscle_Skeletal, Nerve_Tibial, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Small_Intestine_Terminal_Ileum, Testis, Thyroid