rs252144 chr5:142059876 A>G

Sequence
cagtttgcttagagttaataaggt[A/G]gaaggagatttctaaggaatgaac
ASB for transcription factors
CTCF_HUMAN
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 1.07 -0.40 9.3·10-31.00 1.23 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP comorbid depressive syndrome and alcohol dependence,  coronary artery disease (cad),  diastolic blood pressure (dbp),  resistance to kuru in aged women despite likely exposure
GTEx eQTL Artery_Aorta,  Brain_Cortex,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Thyroid

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