ADASTRA v5.1.3
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rs253237
chr5:66247283
C
>
T
Sequence
tgttatatgcataaatacacttat[C/T]gttaaacactacactagatgtcca
ASB in cell types
TTC-1240 (Rhabdoid tumor of the kidney)
HCASMC (Human coronary artery smooth muscle cells)
ASB for transcription factors
SMRC1_HUMAN
JUND_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SMRC1_HUMAN
-2.56
2.48
1.00
0.01
1.00
n/a
n/a
JUND_HUMAN
-0.95
2.10
1.00
0.03
1.67
n/a
No Hit
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
body mass index (bmi)
,
fasting insulin
,
homa-b
,
homa-ir
,
systolic blood pressure (sbp)
,
waist hip ratio
GTEx eQTL
Cells_Cultured_fibroblasts
,
Testis
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)