rs253237 chr5:66247283 C>T

Sequence
tgttatatgcataaatacacttat[C/T]gttaaacactacactagatgtcca
ASB in cell types
TTC-1240 (Rhabdoid tumor of the kidney) HCASMC (Human coronary artery smooth muscle cells)
ASB for transcription factors
SMRC1_HUMAN JUND_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SMRC1_HUMAN -2.56 2.48 1.000.01 1.00 n/a n/a
JUND_HUMAN -0.95 2.10 1.000.03 1.67 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP body mass index (bmi) fasting insulin homa-b homa-ir systolic blood pressure (sbp) waist hip ratio
GTEx eQTL Cells_Cultured_fibroblasts Testis

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