rs253596 chr5:156543456 A>C

Sequence
tcgaagtataatactagtctggag[A/C]cctcaggcagtatgttgctgttag
ASB for transcription factors
FOXA1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA1_HUMAN -0.97 1.91 1.000.03 2.00 n/a No Hit
Items per page:
1 – 1 of 1

Motif analysis

No data available

Genetic associations

GTEx eQTL Artery_Aorta,  Artery_Coronary,  Artery_Tibial,  Heart_Atrial_Appendage,  Heart_Left_Ventricle,  Lung,  Stomach

Download