ADASTRA v5.1.3
Search
Browse
Annotate
Help
Downloads
About
rs254051
chr5:134224006
T
>
G
Sequence
caaagtctgtcacaattactcaag[T/G]aagagcagaaggactcatgtccaa
ASB in cell types
HepG2 (hepatoblastoma)
ASB for transcription factors
ATF7_HUMAN
CREB1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ATF7_HUMAN
-1.79
2.12
1.00
5.4·10
-3
1.00
n/a
n/a
CREB1_HUMAN
-3.33
1.96
1.00
0.02
1.17
n/a
No Hit
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
microalbuminuria
,
years of education
GTEx eQTL
Adipose_Subcutaneous
,
Artery_Tibial
,
Cells_Cultured_fibroblasts
,
Esophagus_Mucosa
,
Esophagus_Muscularis
,
Nerve_Tibial
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Whole_Blood
Download
Download page in JSON
Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale
log2(Alt/Ref motif p-value)