rs2540719 chr16:55444860 G>A
- Sequence
gtttttatttctgaaagtccaaag[G/A]ggaacagtgtaatggaaaaattac
- ASB in cell types
- HUVEC-C (HUVEC, umbilical vein endothelial cells) CD14+ monocytes
- ASB for transcription factors
- TF65_HUMAN STAT1_HUMAN SPI1_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TF65_HUMAN | n/a | 2.70 | 3.25 | n/a | No Hit | |||
| STAT1_HUMAN | -0.13 | 1.16 | 2.00 | n/a | No Hit | |||
| SPI1_HUMAN | -0.23 | 1.24 | 1.94 | 1.13 | Weak Concordant |
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Motif analysis
