rs2541855 chr18:65938730 T>C
- Sequence
aaagcaagttcttgttgaaacagg[T/C]agcagtgaaaaagccagctgaaac
- ASB in cell types
- HeLa (cervical adenocarcinoma) GM18526 (B – cells Lymphoblastoid Cell Lines) HeLa S3 (cervical adenocarcinoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.83 | 1.36 | 1.46 | n/a | No Hit |
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