rs2543076 chr8:39995775 A>G
- Sequence
ataacctaggaaaaaccaggccat[A/G]cagagataggagctaaagggacag
- ASB in cell types
- MCF10AT1 (breast premetastatic epithelial cells) THP-1 (acute monocytic leukemia) TTC-1240 (Rhabdoid tumor of the kidney) MCF10CA1a (breast metastatic epithelial cells)
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.30 | 0.41 | 1.50 | n/a | No Hit | |||
| RAD21_HUMAN | 1.01 | 0.27 | 1.75 | n/a | n/a |
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